BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A02SP1|AL426127
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1702 1520 0.0
>3x_Contig1702
Length = 15454
Score = 1520 bits (762), Expect = 0.0
Identities = 774/783 (98%)
Strand = Plus / Plus
Query: 1 atccatgttacttatrcccttaactaatggaagttacttacgactaccccacacctgccg 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10219 atccatgttacttatacccttaactaatggaagttacttacgactaccccacacctgccg 10278
Query: 61 ttactccttatctttctgctaaacaatattccgtctgtcagtcaatatgttgatgtgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10279 ttactccttatctttctgctaaacaatattccgtctgtcagtcaatatgttgatgtgact 10338
Query: 121 tcgttttgtacaaagaaatcgtacaagagtttaattttgattttggttgagagtgccgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10339 tcgttttgtacaaagaaatcgtacaagagtttaattttgattttggttgagagtgccgat 10398
Query: 181 aacagtgcaaatdaacatagatttgttgaatcaatgttatcagtccctatatctatgcga 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10399 aacagtgcaaataaacatagatttgttgaatcaatgttatcagtccctatatctatgcga 10458
Query: 241 gatactctcgccatctattagttagctattaarcgctttgaggctaatatattadgctaa 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 10459 gatactctcgccatctattagttagctattaaacgctttgaggctaatatattaagctaa 10518
Query: 301 accattctatcttttagacctacataggtatttaccttgcatgchacacaggtcacgtgt 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 10519 accattctatcttttagacctacataggtatttaccttgcatgcaacacaggtcacgtgt 10578
Query: 361 tagaatgtwattattaccagagcagcgatctcggttgthatggtgatatacgatactgac 420
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 10579 tagaatgtaattattaccagagcagcgatctcggttgtaatggtgatatacgatactgac 10638
Query: 421 aggacaaaaatgccttgaagctgttcctagttaatctaccgatttttttggttaattccc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10639 aggacaaaaatgccttgaagctgttcctagttaatctaccgatttttttggttaattccc 10698
Query: 481 ggcgcaaacactatgtagttggctgcttattacgggttaagatgtgggggtttgagtcgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10699 ggcgcaaacactatgtagttggctgcttattacgggttaagatgtgggggtttgagtcgt 10758
Query: 541 cttttcttgtttgaatgtgatttccaatttgcataanagacgatcgaatgabacatctga 600
|||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||
Sbjct: 10759 cttttcttgtttgaatgtgatttccaatttgcataaaagacgatcgaatgaaacatctga 10818
Query: 601 ctagatttacatatgatatgaatagaagtttcataaatttgaacaacaggaaataggcag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10819 ctagatttacatatgatatgaatagaagtttcataaatttgaacaacaggaaataggcag 10878
Query: 661 ccacggccgaggtttagttaattgagaaagcagaatattggagcatgtcagtttgtatag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10879 ccacggccgaggtttagttaattgagaaagcagaatattggagcatgtcagtttgtatag 10938
Query: 721 ttggtgccggtgttattggtttgtcaagtgcgctgagactactggaaacaagacccgata 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10939 ttggtgccggtgttattggtttgtcaagtgcgctgagactactggaaacaagacccgata 10998
Query: 781 tca 783
|||
Sbjct: 10999 tca 11001
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4617
Number of Sequences: 1807
Number of extensions: 4617
Number of successful extensions: 90
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.3 bits)